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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015850791.1_cds_XP_016511288.1_24046
CDS Infomation

[gene=LOC107828480] [db_xref=GeneID:107828480] [protein=probable pectate lyase 18] [protein_id=XP_016511288.1] [location=join(4852..4970,5272..6012,6498..6636,6727..6951)] [gbkey=CDS]
Sequence

ATGGGCTCTATTTCTCTTTCTTTCCTCTTCCTCTTGTCTTCACTTCTCCTTCTCCCGTCC
CTCATTGCCTCCTCCTCTTCCCTATCTGATCCTCAAGCTGTTGTAGATGAAGTACATAGG
AGCGTAAATGCTTCAAGAAGGAACTTAGGCTATCTATCTTGTGGTACCGGAAATCCTATT
GATGATTGCTGGCGTTGTGATCCGAACTGGGAGAAGAACCGCCAACGGTTAGCTGATTGC
GCCATTGGCTTTGGCAAAAACGCCGTTGGCGGTAGAGACGGTAAAATTTACGTGGTCACC
GACTCAGGTGACGACGATCCTGTCAACCCAAAGCCGGGGACTCTCCGTCATGCTGTAGTC
CAAACTGAACCGTTGTGGATAATTTTTGCTAGGGATATGGTTATCCAATTAAAAGAAGAA
CTTATTATGAACTCATTCAAAACAATTGATGGAAGAGGTGCGAGTGTACATATTGCGGGC
GGTCCATGTATAACAATACAGTACGTGACGAATATTATTATACATGGAATTCACATACAT
GATTGTAAGCAAGGAGGGAATGCTATGGTGCGGAGCTCCCCATCGCATTACGGGTGGAGA
ACTATTTCTGATGGTGATGGAGTGTCGATATTTGGTGGGAGCCATGTTTGGGTGGACCAT
TGCTCTTTGTCTAACTGCAAAGACGGCTTGATTGACGCCATTATGGGGTCCACAGCTATT
ACAATTTCTAATAATTTCATGACTCACCATGATAAAGTTATGCTCTTGGGACACAGTGAT
TCTTATGTTCAAGACAAGAATATGCAAGTTACCATTGCTTTCAATCACTTTGGGGAAGGC
CTTGTCCAAAGAATGCCAAGATGTAGACATGGTTATTTCCATGTGGTGAACAATGACTAC
ACCCATTGGGAAATGTATGCAATTGGTGGAAGTGCTAGTCCCACCATCAATAGTCAAGGC
AACAGATTTCTTGCCCCTGATATTAGGTTTAGCAAAGAGGTAACAAAACATGAGGATGCA
CCAGAGAGTGAATGGAAGAATTGGAATTGGAGAACAGAAGGGGATTTAATGTTAAATGGT
GCATATTTCACACAATCAGGAGCTGGAGCCAAATCATCAAGTTATGCTAAGGCTTCAAGT
TTAAGTGCAAGACCTTCTTCTTTGGTCAGCAATTTAGTATCTGGTTCTGGCGCTCTCAAT
TGCCGAAAGGGTTCTCGTTGCTGA

Peptide Sequence

PEP ID

XP_016511288.1
PEP Infomation

PREDICTED: probable pectate lyase 18 [Nicotiana tabacum]
Sequence

MGSISLSFLFLLSSLLLLPSLIASSSSLSDPQAVVDEVHRSVNASRRNLGYLSCGTGNPI
DDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGKIYVVTDSGDDDPVNPKPGTLRHAVV
QTEPLWIIFARDMVIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGIHIH
DCKQGGNAMVRSSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCKDGLIDAIMGSTAI
TISNNFMTHHDKVMLLGHSDSYVQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWEMYAIGGSASPTINSQGNRFLAPDIRFSKEVTKHEDAPESEWKNWNWRTEGDLMLNG
AYFTQSGAGAKSSSYAKASSLSARPSSLVSNLVSGSGALNCRKGSRC

Transcript Sequence

Gene sequence data has not been registered.